ChatSpatial

local MCP server

Installation

Terminal

claude mcp add chatspatial -- uvx chatspatial

Run in your project folder. Add --scope user to use it everywhere.

Add to claude_desktop_config.json or .cursor/mcp.json.

{
  "mcpServers": {
    "chatspatial": {
      "command": "uvx",
      "args": [
        "chatspatial"
      ]
    }
  }
}

Schema-enforced spatial transcriptomics analysis with 20 tools and 66 methods via MCP

ChatSpatial is a local MCP server distributed as the pypi package chatspatial.

Run: claude mcp add chatspatial -- uvx chatspatial

Run: codex mcp add chatspatial -- uvx chatspatial

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