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NeKo Biological Network Builder

local MCP server

Installation

Terminal

claude mcp add neko -- uvx mcp-biomodelling-servers

Run in your project folder. Add --scope user to use it everywhere.

Claude Desktop, Cursor & other clients

Add to claude_desktop_config.json or .cursor/mcp.json.

{
  "mcpServers": {
    "neko": {
      "command": "uvx",
      "args": [
        "mcp-biomodelling-servers"
      ]
    }
  }
}

Summary

MCP server for biological network construction and analysis using pathway databases

Questions

NeKo Biological Network Builder is a local MCP server distributed as the pypi package mcp-biomodelling-servers.

Run: claude mcp add neko -- uvx mcp-biomodelling-servers

Run: codex mcp add neko -- uvx mcp-biomodelling-servers

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